PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003747.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 96aa MW: 10577.2 Da PI: 7.5065 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.8 | 7.3e-09 | 5 | 31 | 1 | 27 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk 27 +p+G+rFhPtdeel+ +yL k + ++ Rmu_sc0003747.1_g000001.1 5 VPMGVRFHPTDEELIEHYLYLKNNPNS 31 599****************98876655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MDHCVPMGVR FHPTDEELIE HYLYLKNNPN SDPNPILGNL EVNFSFAGGE SVQALEASSK 60 IFSGRGRAVY KTFHMSCIVF CALASKGMLN GIKKVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 6e-07 | NAC family protein |