PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003724.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 343aa    MW: 37729.1 Da    PI: 9.4145
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003724.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.5e-19195228134
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                                Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  Rmu_sc0003724.1_g000022.1 195 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 228
                                *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MAPPFLELST IGSHDHDQDQ YDHHHHDLFN YLEPQSSFSS TTSSLSSPIF LSPAQVQGPI  60
SDHYYREQQN FQFQLLEADH IVSYGGSCDH DQTLGNEGEK GTLISKHGAD DHRNHESRST  120
RAENISVKWM SSKMRIMRKM TNPDQTISSN TTAATNDSTA RVNFSSSHNF EEQKLHPSSP  180
LGTDSSNNTN PIRVCSDCNT TKTPLWRSGP RGPKSLCNAC GIRQRKARRA MAAAAAAANG  240
TTLAVEAAPS MIKTSKVKLK DNKTIPFKKR CHKLTTSPSP RGKSKTKLRY KDFSISSMNQ  300
NSGAVPPTTA TTTTTTTFQR VFPQDEKEAA ILLMALSCGL VQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.11e-20GATA family protein