PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003707.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 33036.9 Da PI: 10.1912 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.7 | 1.7e-10 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 +++W +eE+ l+ +v ++G g W+tI + R+ ++k++w+++ Rmu_sc0003707.1_g000008.1 5 KQKWNAEEEAALKAGVVKHGAGKWRTILKDPEfarilYLRSNVDLKDKWRNL 56 79***********************************88***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGAPKQKWNA EEEAALKAGV VKHGAGKWRT ILKDPEFARI LYLRSNVDLK DKWRNLSVMV 60 NGWGSRDKCK TVTRRMPQVP KQEDSSMALS AGQSDEEVMD AKPMTASSDS QQVSAPKRSI 120 VRLDDLIMEA ITSLKDPGGS NKTTIATYIE EQYWAPPDFK RLLSAKLKFL TASGKLIKVK 180 RRYRIAPTPT FSEKRRNSSM FLFEGRQRAS PKFDKDDGTM LMKTQIDLEL AKMRTMTSQE 240 AAAAAARAVA EAEAAIAEAE EAAREAEAAE ADAEAAQAFA DAAMKTLKGR NPAKMMSRA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-98 | MYB_related family protein |