PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003693.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 674aa MW: 75828.7 Da PI: 4.8303

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003693.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	94.5	1.7e-29	9	159	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........................kvka..eekewy 59 pp +r +Pt el++++L+kk + k+ ++ ++i+ +d++k+eP++Lp + + ++ +wy Rmu_sc0003693.1_g000002.1 9 PPEYRCRPTKTELLCDHLAKKNRCKDSQIMSIIPVIDLCKHEPRELPGlaftrqenlgrklyfdfffrftraE--SwySQGKWY 90 777899*********************999***********55899999999999999776431..2435669* PP NAM 60 fFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 fF++r+ ky++++r+nr+t +g Wk tgkd+++++ ++ ++g k++L+f k pk++kt v+hey Rmu_sc0003693.1_g000002.1 91 FFAPREYKYPNSTRSNRTTGEGSWKVTGKDRDIKAPgSEDVIGRKRILTFQKRGVPKSHKTGYVIHEYY 159 *********************************9566679***********************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MSCDHLPVPP EYRCRPTKTE LLCDHLAKKN RCKDSQIMSI IPVIDLCKHE PRELPGLAFT 60 RQENLGRKLY FDFFFRFTRA ESWYSQGKWY FFAPREYKYP NSTRSNRTTG EGSWKVTGKD 120 RDIKAPGSED VIGRKRILTF QKRGVPKSHK TGYVIHEYYH IQPHSDPPKQ IGDFVVCCLK 180 YKPVSDHDED APFCNRGSGS CSIVSNVANQ AEENLASNEQ FNGTDDEAET GGGWITEAEE 240 HLAYKRDGLR TAIGNQNGFQ GSQTDPCNLW TSVEGQADRS NSSHMIEERL DDPENMDSFF 300 HPPVPPQLHQ LHQSPMYTTN VQNDECRKRK YPFEDNDSSL TKKNNISTND GDELVSNTTA 360 NSENQAADVI LEGDPVICRL KNKSDKKDSL VSDEGEPDSA GVSNWKIQAA HKNDEPLLHQ 420 PQRLDDCCSS AVRSPASPEL EAVLQLANGD DCNKLQSPCG DNTSCLEDKN EVSTCYEDET 480 MDGVFLQLCD LPEVNLDSFL RPIQPQDYRP SILQSSIYTK LGNVPDANRS FSECKNWQSA 540 FKKKTSTNEV DIPVRHSMSN FENEATDSVI LEVHCQTKEN MESAFYPLQL EDSALQSMMY 600 TKHGDALHNI ECNELQSYCS DQIAQTPSID SNLPNSLGRV YHGDSGISSY DTNTEVAHGW 660 EQHTSALAIG NPPM

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MSCDHLPVPP EYRCRPTKTE LLCDHLAKKN RCKDSQIMSI IPVIDLCKHE PRELPGLAFT  60
RQENLGRKLY FDFFFRFTRA ESWYSQGKWY FFAPREYKYP NSTRSNRTTG EGSWKVTGKD  120
RDIKAPGSED VIGRKRILTF QKRGVPKSHK TGYVIHEYYH IQPHSDPPKQ IGDFVVCCLK  180
YKPVSDHDED APFCNRGSGS CSIVSNVANQ AEENLASNEQ FNGTDDEAET GGGWITEAEE  240
HLAYKRDGLR TAIGNQNGFQ GSQTDPCNLW TSVEGQADRS NSSHMIEERL DDPENMDSFF  300
HPPVPPQLHQ LHQSPMYTTN VQNDECRKRK YPFEDNDSSL TKKNNISTND GDELVSNTTA  360
NSENQAADVI LEGDPVICRL KNKSDKKDSL VSDEGEPDSA GVSNWKIQAA HKNDEPLLHQ  420
PQRLDDCCSS AVRSPASPEL EAVLQLANGD DCNKLQSPCG DNTSCLEDKN EVSTCYEDET  480
MDGVFLQLCD LPEVNLDSFL RPIQPQDYRP SILQSSIYTK LGNVPDANRS FSECKNWQSA  540
FKKKTSTNEV DIPVRHSMSN FENEATDSVI LEVHCQTKEN MESAFYPLQL EDSALQSMMY  600
TKHGDALHNI ECNELQSYCS DQIAQTPSID SNLPNSLGRV YHGDSGISSY DTNTEVAHGW  660
EQHTSALAIG NPPM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	3e-26	NAC family protein