PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003690.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 85aa MW: 9324.52 Da PI: 11.37 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 48.1 | 4.6e-15 | 48 | 85 | 2 | 39 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeL 39 g+kdrh k++ ++g+Rd RvRl a++a++f+d qd+L Rmu_sc0003690.1_g000002.1 48 IGRKDRHNKVCIAKGPRDHRVRLAAHTAIQFYDAQDRL 85 589*********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MGESHNNLHH RALTSSSAAS RLGLGIRTAS SSTASEIMEA QGHILRAIGR KDRHNKVCIA 60 KGPRDHRVRL AAHTAIQFYD AQDRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 2e-23 | TCP family protein |