PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003636.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GRAS | ||||||||
Protein Properties | Length: 139aa MW: 16515 Da PI: 8.4867 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 106.7 | 3.2e-33 | 3 | 137 | 221 | 354 |
GRAS 221 eserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304 +s+rd vLkl+k+++P+++++ ++ hn++ F++r+ eal +y a+fd +ea+ p+e++ +++E+ + gr+i+n++aceg e Rmu_sc0003636.1_g000008.1 3 NSPRDVVLKLIKNINPNLFIHGIRNGTHNTPFFATRIREALLHYYAVFDVFEATNPHEENRWMMLEKDFHGRDIMNIIACEGVE 86 4689**************************************************9***************************** PP GRAS 305 rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354 r+er et++kW+ r +aG+k++pl+ + k+ak l + ++ + +r++e+ Rmu_sc0003636.1_g000008.1 87 RVERPETYKKWQIRNVRAGLKQLPLDRELLKKAKKLSELMGyHNDFRLDED 137 **************************************9999999*99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MENSPRDVVL KLIKNINPNL FIHGIRNGTH NTPFFATRIR EALLHYYAVF DVFEATNPHE 60 ENRWMMLEKD FHGRDIMNII ACEGVERVER PETYKKWQIR NVRAGLKQLP LDRELLKKAK 120 KLSELMGYHN DFRLDEDGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07520.1 | 2e-47 | GRAS family protein |