PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003480.1_g000013.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 292aa MW: 32957.7 Da PI: 4.898

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003480.1_g000013.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.7	1e-32	114	170	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+edp++++itYeg H h Rmu_sc0003480.1_g000013.1 114 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEDPDTLIITYEGLHLH 170 8******************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MEEAMSTNWP DGLEEELVRE LLDNESPFFV LPEEAVEYPQ MSVSNKEGLN RFVQNVYSGP 60 TIHDIETALS VTTGITVQPQ ELSQARLSIL ERGLSKVEHK YTLKIKSCDS GMADDGYKWR 120 KYGQKSIKNS PNPRSYYRCT NPRCSAKKQV ERSSEDPDTL IITYEGLHLH FAYPFFHLTQ 180 AQNPNPPTKK PKKRTLAAQP EDHEQEAQES PRSVTPDPEY DLQPGAFTDQ PQEFVEEERG 240 SQGLLEDVVP FIIRKPSSAS NSSCCSYRSP PTSPPSLSWP SYFDVGINHS IG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43290.1	1e-52	WRKY family protein