PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003242.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 386aa MW: 44558.1 Da PI: 6.7678

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003242.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.8	1.4e-29	107	160	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F++a+e LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Rmu_sc0003242.1_g000001.1 107 PRLRWTPQLHLSFLHALELLGGHERATPKLVLQLMNVRGLSISHVKSHLQMYRS 160 8****************************************************7 PP
2	Myb_DNA-binding	43.1	1e-13	108	159	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++a ++lGg+ t+k++ + m+ g++ ++ks++q+y+ Rmu_sc0003242.1_g000001.1 108 RLRWTPQLHLSFLHALELLGGHeraTPKLVLQLMNvRGLSISHVKSHLQMYR 159 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MMNEVELIGD QKEKTDKNIS EDQAENISVG SSQKCSCFDL NEEASDNSDN DNSDNSNANV 60 NLDDHELSTV RNDERRALAQ GNINSNAATI SNSSRVKVRP YVRSKLPRLR WTPQLHLSFL 120 HALELLGGHE RATPKLVLQL MNVRGLSISH VKSHLQMYRS KKLDRDGQVV SDEKTYDYTD 180 GRESRDHIPN FDSRSSSLTK KEVVQGNNLN KALHQTSTPI NPSRLREEKR WPPFQSISKS 240 WRARRFASNN INWSNSHNGS SQSDIMHHMI SNRPTDHDLR SWNLEGHSNS SSYKQEFEPP 300 FRLEWNKEKI LKYKEWMPDL ELGLQSQRVW NEINDETQHH QTISHAEGNY ETVQGVIETS 360 QYYKDHQFED MNSKQETIST KLSLSL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MMNEVELIGD QKEKTDKNIS EDQAENISVG SSQKCSCFDL NEEASDNSDN DNSDNSNANV  60
NLDDHELSTV RNDERRALAQ GNINSNAATI SNSSRVKVRP YVRSKLPRLR WTPQLHLSFL  120
HALELLGGHE RATPKLVLQL MNVRGLSISH VKSHLQMYRS KKLDRDGQVV SDEKTYDYTD  180
GRESRDHIPN FDSRSSSLTK KEVVQGNNLN KALHQTSTPI NPSRLREEKR WPPFQSISKS  240
WRARRFASNN INWSNSHNGS SQSDIMHHMI SNRPTDHDLR SWNLEGHSNS SSYKQEFEPP  300
FRLEWNKEKI LKYKEWMPDL ELGLQSQRVW NEINDETQHH QTISHAEGNY ETVQGVIETS  360
QYYKDHQFED MNSKQETIST KLSLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-28	G2-like family protein