PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003221.1_g000074.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 301aa    MW: 31672.2 Da    PI: 6.778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003221.1_g000074.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.4e-19160210255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  Rmu_sc0003221.1_g000074.1 160 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 210
                                8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MYGQSGSDAD FTLLDSIRRH LLGGENNNHN PVTNSGAGPI FSRSSSFSSL YSCLTDNWGE  60
LPLKENDSED MVLYGVLRDA VSVGWVPSLG SGCGSADGFG FEFAVKSEPC SFDFEVKSEP  120
EEASAAPVSR VPETNSAVVA VTQQSAQAKP AVVVAPKGKH YRGVRQRPWG KFAAEIRDPA  180
KNGARVWLGT FETAEDAALA YDRAAYRMRG SRALLNFPLR VNSGEPDPVR VTSKRSSPEP  240
ASSSESGSPK RRKKAAAAAA TATATAVQAG LEMGSGIGIG QQQVGGQVGV SCTNGEQLLV  300
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.17e-60ERF family protein