PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003200.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 131aa MW: 15063.5 Da PI: 9.9885 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 33.8 | 8.8e-11 | 19 | 110 | 2 | 102 |
HHHHHHHHHC..TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEE CS HSF_DNA-bind 2 Flkklyeile..deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkh 83 F+++ly +l ++++++ ++ws+++n f v+ + ++ + p +F + ++ F +QL +YgF d + w++++ Rmu_sc0003200.1_g000001.1 19 FIRQLYILLCtnQKSVSDALRWSADENRFGVVSDKCLKA-IFPLHFPGTAYSNFDKQLVLYGFVA--DGR--------WWKHEE 91 99****9986558899*******999***********99.***********************53..222........488888 PP SXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 84 ksFkkgkkellekikrkks 102 + F+k+ ell +ik ++ Rmu_sc0003200.1_g000001.1 92 NLFRKDFPELLVHIKPRSM 110 8899999999999998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
TNMFSLVVDY SLPSGVVPFI RQLYILLCTN QKSVSDALRW SADENRFGVV SDKCLKAIFP 60 LHFPGTAYSN FDKQLVLYGF VADGRWWKHE ENLFRKDFPE LLVHIKPRSM SNLFTNSHLK 120 IALQPTKKRG G |