PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0003124.1_g000019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 143aa MW: 16189.3 Da PI: 10.4515 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 46.5 | 6.2e-15 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L+el+ + r p+ae+++++ +l +++ + +++WF N+ a+e++ Rmu_sc0003124.1_g000019.1 30 STRWTPTTYQIRILKELYCNkgVRSPTAEQIQRICLQLkrygKIEGKYIFYWFGNHMARERQ 91 58****************97679*************************************96 PP | |||||||
2 | Wus_type_Homeobox | 95.9 | 3.4e-31 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt+ Qi+iL+ely +G+r+P++e+iqri +L++yGkie+k +fyWF N+ aRerqk+ Rmu_sc0003124.1_g000019.1 29 SSTRWTPTTYQIRILKELYCnKGVRSPTAEQIQRICLQLKRYGKIEGKYIFYWFGNHMARERQKK 93 689****************669*****************************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 143 aa Download sequence |
MEPKTQQPTE DGGSNKIAGS SANMLYRRSS TRWTPTTYQI RILKELYCNK GVRSPTAEQI 60 QRICLQLKRY GKIEGKYIFY WFGNHMARER QKKRFTSDVH VPMQRSGLIG NGNGTNWKPE 120 DQYINFGSSA SASASSAGVI AFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-31 | WOX family protein |