PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003115.1_g000036.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

BES1

Protein Properties

Length: 786aa MW: 87437 Da PI: 6.6125

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003115.1_g000036.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	138.2	8.1e-43	166	302	1	128
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...ee 78 gg++r ++ +E+E++k RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtty+ +g +p ++ Rmu_sc0003115.1_g000036.1 166 GGARRCRPLEEKERTKIRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTYPsnsQGPRPAgvsST 249 6899*****************************************************************955555556565333 PP DUF822 79 aeaagssasaspesslqsslkssalaspvesysa...spksssfpspssldsi 128 a++ ss+ +s++++++++ ++s +s ve+ + +ks+ +p++s +d Rmu_sc0003115.1_g000036.1 250 AATSSSSQMMSQTTPVSLKGVTSGYQSSVEHNAGlpgHMKSVFMPASSPYDLP 302 33444444477888888777777788888777651114577777887777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MLARFLPSPP PPRPDPTVSA LFRPPLSGAR FVSVKPTCAR SPAAGISSFW RRIEHGSGAL 60 SSERARGSGI GGVFGRSRVN WRFSFEGIMA TDIQRLIGTS EEDDEEEMDM DVKEEGDGDD 120 DEDVEKHVDS TPMMIGVDGG MATSSCNNNR FQQHQQMQEV GTPGGGGARR CRPLEEKERT 180 KIRERQRRAI TAKILAGLRR HGNYNLRVRA DINDVIAALA REAGWVVLPD GTTYPSNSQG 240 PRPAGVSSTA ATSSSSQMMS QTTPVSLKGV TSGYQSSVEH NAGLPGHMKS VFMPASSPYD 300 LPSIITGDGG DQTQSHPLIG GSMDNVGDKQ IVDMPQKLPE RDFANTAYIP VYVMLPLGVI 360 NMKCELVDPD GLLKQLRVLK SVNVDGVMVD CWWGIVEGHA PLEYNWNGYK RLFQMVRDLK 420 LKLQVVMSFH ECGGNVGDDV CITLPHWVAE IGRSNPDIFF TDRAGRRNPE CLSWGIDKER 480 VLRGRTAVEV YFDCMRSFRV EFDEFFQDGI ISMIQVGLGP CGELRFPSCT VKHGWRYPGI 540 GEFQCYDQYL LKSLRKAAEA RGHSFWGRGP DNAGSYNSRP HESGFFCDGG DYDGYYGRFF 600 LNWYSRVLVD HGDRVLSLAK LAFDGTCIAA KLSGIHWWYK TPSHAAELTA GFYNPCNRDG 660 YAAIMMMLKK HGASLNLVCT QLHTLDQNID FQEAMGDPEG LFWQVLNAAW DVCVPVSSEN 720 ALLCHSRVGY NKILDNSKPL TDPDGRHLSS FTYLRLSPLL MERHNFMEFD RFVKRMHGEA 780 VLDLHV

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MLARFLPSPP PPRPDPTVSA LFRPPLSGAR FVSVKPTCAR SPAAGISSFW RRIEHGSGAL  60
SSERARGSGI GGVFGRSRVN WRFSFEGIMA TDIQRLIGTS EEDDEEEMDM DVKEEGDGDD  120
DEDVEKHVDS TPMMIGVDGG MATSSCNNNR FQQHQQMQEV GTPGGGGARR CRPLEEKERT  180
KIRERQRRAI TAKILAGLRR HGNYNLRVRA DINDVIAALA REAGWVVLPD GTTYPSNSQG  240
PRPAGVSSTA ATSSSSQMMS QTTPVSLKGV TSGYQSSVEH NAGLPGHMKS VFMPASSPYD  300
LPSIITGDGG DQTQSHPLIG GSMDNVGDKQ IVDMPQKLPE RDFANTAYIP VYVMLPLGVI  360
NMKCELVDPD GLLKQLRVLK SVNVDGVMVD CWWGIVEGHA PLEYNWNGYK RLFQMVRDLK  420
LKLQVVMSFH ECGGNVGDDV CITLPHWVAE IGRSNPDIFF TDRAGRRNPE CLSWGIDKER  480
VLRGRTAVEV YFDCMRSFRV EFDEFFQDGI ISMIQVGLGP CGELRFPSCT VKHGWRYPGI  540
GEFQCYDQYL LKSLRKAAEA RGHSFWGRGP DNAGSYNSRP HESGFFCDGG DYDGYYGRFF  600
LNWYSRVLVD HGDRVLSLAK LAFDGTCIAA KLSGIHWWYK TPSHAAELTA GFYNPCNRDG  660
YAAIMMMLKK HGASLNLVCT QLHTLDQNID FQEAMGDPEG LFWQVLNAAW DVCVPVSSEN  720
ALLCHSRVGY NKILDNSKPL TDPDGRHLSS FTYLRLSPLL MERHNFMEFD RFVKRMHGEA  780
VLDLHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein