PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003005.1_g000026.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 436aa MW: 47884.7 Da PI: 6.7045 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.3 | 1e-30 | 173 | 231 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r aed++++++tYeg+Hnh+ Rmu_sc0003005.1_g000026.1 173 SDGCQWRKYGQKMAKGNPCPRAYYRCTMVaGCPVRKQVQRLAEDKTILITTYEGNHNHP 231 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence |
MDEQLCDLKH LHSDQSFLGL SSSSDHRLVE PPIKEETLFK EIKEVDFLSN NRLPNQPPPG 60 HAELTTLQLQ VELQREHEEN QKLRTILDQI TKNYNGLQAQ LRMIRLQEQL QTCAEDSNLD 120 PKLSFLHDDQ SPKSSSHHDH DQEQVPAVTD HDQVPLRRAR VSVRARSEAP MISDGCQWRK 180 YGQKMAKGNP CPRAYYRCTM VAGCPVRKQV QRLAEDKTIL ITTYEGNHNH PLPAAAISMA 240 NTTSAAAAML ISGSTTSKEA HHHLTHPTGL FSSLQPLYGS SMATFSTSAP FPSITLDMTR 300 TPNPNPNPNP MQFMDSSATF PNPLQGYSHP LIGHPMCLNF PQHNHAALTP AAMQLADRPH 360 GSMVETITSA ITSDPKFTTA LAAALSSRMN NVENINAGLQ GSTNDIGSLN SNGSEVCAAF 420 SGSPQLPQSC TTFSTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01720.1 | 9e-57 | WRKY family protein |