PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002934.1_g000055.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 350aa    MW: 38513.1 Da    PI: 8.8396
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002934.1_g000055.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox505.1e-16138198357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t+ ql++L+ l++    +yp+ e+++e+  +l    ++++++V++WFqN +a e++
  Rmu_sc0002934.1_g000055.1 138 NRWTPTPAQLRILQGLYYDkgYKYPTPEQIQEICLHLkpygQIEDKNVFFWFQNLKASERQ 198
                                7****************96579************************************996 PP
2Wus_type_Homeobox88.76.1e-29136199264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+iedkNVf+WFQN ka erqk
  Rmu_sc0002934.1_g000055.1 136 TNNRWTPTPAQLRILQGLYYdKGYKYPTPEQIQEICLHLKPYGQIEDKNVFFWFQNLKASERQK 199
                                579***************9889*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MLAAGLFRSR QRYDVGYATL RHLLQIHHYS ASLFLLLLLY EIRPMNFAKT ISETRPIGPP  60
PTATVRALIR DKTKYGPPAA AYPFRELRKS ESLSAKAVCH SALRFVLSPY TLSTRQQLFR  120
NNQAAGSSAN TPIRPTNNRW TPTPAQLRIL QGLYYDKGYK YPTPEQIQEI CLHLKPYGQI  180
EDKNVFFWFQ NLKASERQKL KEFRNVKVGG SLDLNFGSIS STNDGRSIDL HFGSTGSTGD  240
DGSIDLTLGS RVGYGVDPYS SSPFNANIST TSFGPTGGQS SMEQRGGDHQ EVETLPLFPV  300
HDDDVLGNPM TTSEEGSAFG YYSGGSGSYN SGSQVSLELS LNPFGATDLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-20WOX family protein