PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002902.1_g000045.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HSF

Protein Properties

Length: 361aa MW: 41156.5 Da PI: 5.2356

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002902.1_g000045.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114	9.4e-36	45	136	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d+++++++sws+ g sfvv+d+++f ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ Rmu_sc0002902.1_g000045.1 45 FLNKTYDMVDDPSTNRIVSWSRGGGSFVVWDPHSFVMNLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEG 119 9**************************************************************999.........*** PP XXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkks 102 F +g+k+ll++i+r+k+ Rmu_sc0002902.1_g000045.1 120 FLRGQKHLLKNIRRRKT 136 *************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MNYLYPVKDE YPGGSSSSQW SGDPLMTVAP PQPMEGLNDT GPPPFLNKTY DMVDDPSTNR 60 IVSWSRGGGS FVVWDPHSFV MNLLPRYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF 120 LRGQKHLLKN IRRRKTPSQP IPAHQALGPC VEVGRFGLDG EVDRLRRDKQ VLMMELVKLR 180 QQQQSTRACL QAMEQRLKGT EMKQQQMMAF LARALQNPAF LQQLVQHKEK RKELEEAVTK 240 KRRRPIDQGP SGFGGGETNQ RGKGINPVKA EPLEFGDGEY EMSELEALAM EMQGFHKARK 300 EPEEESELLE IGDKELDEGF WDELFSERFE GDLSIPCAEI GDDEDVIILA DRLGYLGSSP 360 N

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MNYLYPVKDE YPGGSSSSQW SGDPLMTVAP PQPMEGLNDT GPPPFLNKTY DMVDDPSTNR  60
IVSWSRGGGS FVVWDPHSFV MNLLPRYFKH NNFSSFVRQL NTYGFRKVDP DRWEFANEGF  120
LRGQKHLLKN IRRRKTPSQP IPAHQALGPC VEVGRFGLDG EVDRLRRDKQ VLMMELVKLR  180
QQQQSTRACL QAMEQRLKGT EMKQQQMMAF LARALQNPAF LQQLVQHKEK RKELEEAVTK  240
KRRRPIDQGP SGFGGGETNQ RGKGINPVKA EPLEFGDGEY EMSELEALAM EMQGFHKARK  300
EPEEESELLE IGDKELDEGF WDELFSERFE GDLSIPCAEI GDDEDVIILA DRLGYLGSSP  360
N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	244	KRKELEEAVTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-119	HSF family protein