PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002897.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 200aa MW: 22230.6 Da PI: 4.7624 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 45.1 | 1.7e-14 | 39 | 98 | 3 | 56 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+t+t++ql++L+ l++ ryp+ e+++++ +l ++++++V++WFq + +ek Rmu_sc0002897.1_g000004.1 39 NRWTPTPDQLRILKVLYYDkdLRYPTPEQIQDICLHLkqygQIEDKNVFFWFQKLKVREK 98 7****************96579*********************************99999 PP | |||||||
2 | Wus_type_Homeobox | 85.9 | 4.3e-28 | 37 | 100 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RWtPtp+Q++iL+ ly+ + lr P+ e+iq+i +L++yG+iedkNVf+WFQ k Re++k Rmu_sc0002897.1_g000004.1 37 TNNRWTPTPDQLRILKVLYYdKDLRYPTPEQIQDICLHLKQYGQIEDKNVFFWFQKLKVREKEK 100 689***************98799***************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MEPRTLQLME LQTQQPTEEG GSNQAAGSSA NTPIRQTNNR WTPTPDQLRI LKVLYYDKDL 60 RYPTPEQIQD ICLHLKQYGQ IEDKNVFFWF QKLKVREKEK MRLIQNVRVG GSLDVNFGST 120 SSTDDGGGQT FMEQRGGDHQ EIETLPLFPV HGEDVLGNPK TTSEEGSTYG YYSGGSGGYN 180 SGSHVSLELS LNPSGAVDLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 7e-24 | WOX family protein |