PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002895.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 253aa MW: 28871.5 Da PI: 9.2777

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002895.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.9	1.6e-17	18	96	14	98
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +rl +p f+++ g +++ + +l+ ++g+sW+v l + + ++ ++ kGW++Fvk + L+egDf+vF+++g+ +f v++++ Rmu_sc0002895.1_g000002.1 18 RRLKMPTAFVDKLRGTPPC--KCVLRGPNGQSWNVAL--EERESGLFFCKGWRKFVKYHCLEEGDFLVFHYTGKLKF--DVTIYD 96 47999******999888..7***********..999999***********************9885555..777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MAASKPAFFT VLIGDFCRRL KMPTAFVDKL RGTPPCKCVL RGPNGQSWNV ALEERESGLF 60 FCKGWRKFVK YHCLEEGDFL VFHYTGKLKF DVTIYDESAC EMDLEVSKRR SLADGSSDQV 120 MSGKAVIEET PTGLTVFQSR NSCFMKTLET YRRYDLTIPQ KIVKAEGLKG HMSLTLRDPE 180 KRSRIVETDV TLDKRLKLTK GWCQGCREFN ISIGDKVVFE FVKPNVIQLH IFRGKDVLLS 240 GPKVVDSSNY RQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34400.1	1e-18	B3 family protein