PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002888.1_g000048.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 208aa    MW: 23944.5 Da    PI: 4.7629
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002888.1_g000048.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.33.2e-1757101147
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                +g+ T++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Rmu_sc0002888.1_g000048.1  57 KGNITEDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 101
                                6899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MGRSSTYYDK NDGLKKGAWA ASEDQIVKAY VKKHGLKRCG KSVRLRWLNY LRPDIIKGNI  60
TEDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS TLKRKLQEEN QLEVSKDEEI  120
KEGLSSSAAD EDDPHLTKDN VIEDEDHRRQ HHDVDVGVGV GVGVEATNNN GTGDDEYLRD  180
DLWWNNFIMD FNATQLDVSE FQTDFPEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.14e-45MYB family protein