PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002881.1_g000007.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 350aa MW: 40751.3 Da PI: 6.6758 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.7e-07 | 192 | 254 | 1 | 47 |
TSSS-HHHHHHHHHHHHH.TTTT................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkq.lGgg................tWktIartmgkgRtlkqcksrwqky 47 +grW++eE e l d+v++ l ++ +W++I++t+g +Rt c +w++ Rmu_sc0002881.1_g000007.1 192 KGRWSQEEYETLFDLVNMdLRMKvfeekktkhgilrdniCWEAISETLG-TRTNAVCSMKWYNQ 254 79**************9757777**************************.***********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MASTWFCGVN EGSLIAPKSI GAPDNSEKST PKKASKRVSF ADDVEVFSPS DGPNDEHEDL 60 VRGKRFSEEE DKIVKEAVLR YIEEHALGDD GLNMVLRCKS HPEVKNHPEL KNCWKDIGAA 120 LPWRPFKSVY YRAHILFERA EKRIWTPEEY EEVKKFHKDW GADWRTLGDK LGKHRIHVKD 180 AWRRIKLPNQ KKGRWSQEEY ETLFDLVNMD LRMKVFEEKK TKHGILRDNI CWEAISETLG 240 TRTNAVCSMK WYNQLTSPLV SQKLWADIDD YRLLDALNSL DACCIEDVDW DDLLEHRPGD 300 VCQKRWHQMV KHIGHHGLKS FPEQVEVLSK HYLADLIEAR EIYASKPAVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G41020.1 | 1e-125 | MYB_related family protein |