PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002800.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 228aa    MW: 25573.4 Da    PI: 6.2507
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002800.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.6e-17654254
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                               +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a   ++
  Rmu_sc0002800.1_g000022.1  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQASILMN 54
                               89****999.**********8.....334********************976665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVQSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAS ILMNGQNAKT  60
NFPNNNPPSD DQETKPTDHL PHGHQLPWDP KELAELLSSK LKKCCKDPSP SLTCLRLDND  120
NSHIGVWQKR PAGSRASSNW VMRIELGKKE KQYNTTVIEN EGSTSSSSYL ISQSSSAGSI  180
TNEAGIAIEE ADEDHGEEDK LAMQMIEELL NWNSYPIPSP TSNVQEGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-60ERF family protein