PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002688.1_g000017.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HB-other
Protein Properties Length: 470aa    MW: 53551.2 Da    PI: 6.7859
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002688.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox16.81.1e-054769325
                               --SS--HHHHHHHHHHHHHSSS- CS
                   Homeobox  3 kRttftkeqleeLeelFeknryp 25
                               +R+t+t+ ql++L+el++++ yp
  Rmu_sc0002688.1_g000017.1 47 NRWTPTPAQLRILQELYYEKDYP 69
                               7*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS NQAAGSSANT PIRPTNNRWT PTPAQLRILQ  60
ELYYEKDYPL HNLNSVPGLQ QHQTRSAFAL LLFDRFVEGC QVFHPLKCWI LVLASVWLSG  120
EKFIWLSFDA IHPADVGLKE ENPDDDRGLG FFRDNLNRVS RWTQPITYFN LYEGDSFTMC  180
IFCFPTSSVI PLHDHPGMTV FSKVLYGSLH VRAYDWVEPS HESKGSNYFP GDEMTLILPF  240
LNLDIKYFDL GLPHHDTTDD KVTVESAEAT FNNITAGYTL DSKGRLQSPK TPMNSGGQSI  300
LSETKWPTFK EFFDPQGAFI AMWYKIFMIS CLILVTADPL FFYIPYINKD KKGFDGDKRV  360
RTAALVLRSL TDMTVWLQNQ LVCKQSLLSE WLRRRASTAG CSRWGEHQPR HRVLFLPFGK  420
GLLCLTRGVT LASLEVTVAV VLAVGSWGDW DWKYGRRVDL VRLTVGSRGD