PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002549.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 526aa MW: 56525.1 Da PI: 6.1169

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002549.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.5e-39	156	216	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk++s Rmu_sc0002549.1_g000020.1 156 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNAS 216 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MSENEISPTI KLFGKTIPLA SAPHNGHEVP TNDDPPCGAS DSSVDSKIAA AASGGGAVEE 60 EDCSVKLPCC SETTSPEDQE NKETISGKEF TADKEEDHPL DQFTEDLKPP TTSSGISENP 120 KTPSADRETS VSLKSSKNGE QSDETSCSQD KTLKKPDKIL PCPRCNSMDT KFCYYNNYNV 180 NQPRHFCKNC QRYWTAGGIM RNVPVGAGRR KNKNASSASH YRHMLMSDAL QTAHATAAAA 240 SNGAHNPTLG RNGTVLTFGS DSPLCESMAS VLNLAEKTQN SLQNGFHVPD QQRILVPSIT 300 GDNGDDQSSG SSNVTASNSS EGGCKAGIQE PAVHNCQSFS PHQVPCFPGS PWPYPWNSPQ 360 WTSAMPPPAF FHSGFPISFY PAPPYWGCTG PGSWNVPCNS PPSSNLSHCG TSSGPNSPTL 420 GKHPRDGDIL NQASSQKEES SRDNRSDRCV LIPKTLRIDD PSEAAKSSIW ETLGIKNEKG 480 NSINEGGIFK SFESKGHEKR QVVEQSSVLQ ANPAAFSRSL NFREIS

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MSENEISPTI KLFGKTIPLA SAPHNGHEVP TNDDPPCGAS DSSVDSKIAA AASGGGAVEE  60
EDCSVKLPCC SETTSPEDQE NKETISGKEF TADKEEDHPL DQFTEDLKPP TTSSGISENP  120
KTPSADRETS VSLKSSKNGE QSDETSCSQD KTLKKPDKIL PCPRCNSMDT KFCYYNNYNV  180
NQPRHFCKNC QRYWTAGGIM RNVPVGAGRR KNKNASSASH YRHMLMSDAL QTAHATAAAA  240
SNGAHNPTLG RNGTVLTFGS DSPLCESMAS VLNLAEKTQN SLQNGFHVPD QQRILVPSIT  300
GDNGDDQSSG SSNVTASNSS EGGCKAGIQE PAVHNCQSFS PHQVPCFPGS PWPYPWNSPQ  360
WTSAMPPPAF FHSGFPISFY PAPPYWGCTG PGSWNVPCNS PPSSNLSHCG TSSGPNSPTL  420
GKHPRDGDIL NQASSQKEES SRDNRSDRCV LIPKTLRIDD PSEAAKSSIW ETLGIKNEKG  480
NSINEGGIFK SFESKGHEKR QVVEQSSVLQ ANPAAFSRSL NFREIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-99	Dof family protein