PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002542.1_g000017.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 262aa MW: 28573 Da PI: 5.6314

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002542.1_g000017.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.5	6.9e-06	30	62	2	32
T--SS--HHHHHHHHHHHHH..SSS--HHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeeree 32 ++R+t+t++q+++L+el+++ r p+ +++++ Rmu_sc0002542.1_g000017.1 30 STRWTPTTDQIRILKELYYNegVRSPTVDQKQK 62 58****************976789999988875 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MEPQTQQSTE DGGSNKAAGS SANMLCRQSS TRWTPTTDQI RILKELYYNE GVRSPTVDQK 60 QKKKRFTSDV HVPMQRSGLV GNGNGTNWKP EDQYINMNNK YSNICQGVSS ASASSAGVIA 120 FNKQMGNYGG YGSMNMEKSF RDCSISAGGG TSSIGVGGSI SHNFGQHPYS SSSYTTSTST 180 TFFDMNEEQT FMEQQGEDHQ EIETLPLFPM HGEDIFGNMK TTSEGGGSYG YYSGGWGGYN 240 GGTRTSLELS LNSYGYNTTN YY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	6e-15	WOX family protein