PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002478.1_g000014.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 369aa MW: 41792.3 Da PI: 8.5407

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002478.1_g000014.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	4e-21	128	213	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YA e+GFsvr+s++ ksk+ e+++++++C keg++++++ ++++ rtgC ak+ k+ g +++t++ + Rmu_sc0002478.1_g000014.1 128 EFYNKYAFEAGFSVRRSSTAKSKDGSETIRQELCCRKEGHSQKHTAL---PKKRKGIIRTGCLAKIAAVKR-CGIYVITQFTEA 207 6*************************************9998777...7888999*****98888.8******* PP FAR1 85 HnHela 90 HnH+l+ Rmu_sc0002478.1_g000014.1 208 HNHPLT 213 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MTPGDFNSWG AQNHRAKIGH WPSSISAAEL SWKPSSGFDL QIKAIEFPSE EAGLLKGCEN 60 LYSSKARKHD DAVMSHEGDR RSGTMFQAMN LGSVSCSAET TEVYTPQVAD ELKPTKNRQF 120 RTLDELFEFY NKYAFEAGFS VRRSSTAKSK DGSETIRQEL CCRKEGHSQK HTALPKKRKG 180 IIRTGCLAKI AAVKRCGIYV ITQFTEAHNH PLTTPERVHL LPSHRQVSNA TKCLTMELGL 240 VNIPTHKQIS LLEVQSGGIE NMGCIGKDIY NYERDKREEL KGHDGDMLYA HFLAQREKNS 300 FFNFKIEEDN ENRIKHCFWA DATSRRAYSF FGDVVIFDTT YNTNKYRLIF APLLGVNHHG 360 QTIMFGCAF

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MTPGDFNSWG AQNHRAKIGH WPSSISAAEL SWKPSSGFDL QIKAIEFPSE EAGLLKGCEN  60
LYSSKARKHD DAVMSHEGDR RSGTMFQAMN LGSVSCSAET TEVYTPQVAD ELKPTKNRQF  120
RTLDELFEFY NKYAFEAGFS VRRSSTAKSK DGSETIRQEL CCRKEGHSQK HTALPKKRKG  180
IIRTGCLAKI AAVKRCGIYV ITQFTEAHNH PLTTPERVHL LPSHRQVSNA TKCLTMELGL  240
VNIPTHKQIS LLEVQSGGIE NMGCIGKDIY NYERDKREEL KGHDGDMLYA HFLAQREKNS  300
FFNFKIEEDN ENRIKHCFWA DATSRRAYSF FGDVVIFDTT YNTNKYRLIF APLLGVNHHG  360
QTIMFGCAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-44	FAR1 family protein