PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002434.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 442aa    MW: 50391.9 Da    PI: 4.3796
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002434.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.96e-169871599
                               -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                                 +lp kf++++gg+   s  + l+ + g +Wev +  ++++++++++kGW eF ++  L+ g f+vF ++g+s+f   v +f+k
  Rmu_sc0002434.1_g000002.1  9 GQRLPYKFVKKYGGE--LSHSVCLKVRGGSKWEVDV--TRRDCKVWFEKGWPEFSNSCSLDHGHFLVFGYEGNSKF--DVCIFDK 87
                               4689********988..7789***************..**********************************9999..9999997 PP
2B350.83e-162303061699
                                EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                  +p++f++++ g+   + + +l++   r+W v +  +   ++++++kGW+eFv++ngLk g+ +vF++ g+s+f  +v +f k
  Rmu_sc0002434.1_g000002.1 230 TKIPREFIQHFHGN--IPHQCRLQT-AARTWAVDV--EEVNNKFYFQKGWNEFVQDNGLKYGELLVFHYAGNSDF--HVDIFGK 306
                                46999999777544..333477665.88*******..999999********************************..***9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MYLIQFSDGQ RLPYKFVKKY GGELSHSVCL KVRGGSKWEV DVTRRDCKVW FEKGWPEFSN  60
SCSLDHGHFL VFGYEGNSKF DVCIFDKTAT EIDYPITVED DDSSGEILED CPKGSRNSGD  120
KSPLPGSPPC KKNRKSSTGK PEINPKIQMD DDDDEENDES DESSEEGEDE DNHGIQKETA  180
FQRAKAYKPA DPHFVVAINP SCTRGGYLHV PSLFSKTYLV KQPTQIMLQT KIPREFIQHF  240
HGNIPHQCRL QTAARTWAVD VEEVNNKFYF QKGWNEFVQD NGLKYGELLV FHYAGNSDFH  300
VDIFGKNTCG KLFVLPEIEE ANEEDDDVSL QISDDSPVSS PPPQKKYKTS SSAKGQMKNK  360
EAHWSKSKMK SRRKIEEAPL AHKDSQDKNL SHDMSDNEDH EKDDEDDDDE EGDEENEDEE  420
EEEEEDDDDS RETVDYVSSD SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-28B3 family protein