PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002376.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 224aa MW: 25800.9 Da PI: 6.257

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002376.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25	3.2e-08	162	195	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Rmu_sc0002376.1_g000005.1 162 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 195 469*****************************87 PP
2	ELK	29.9	1.2e-10	116	137	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Rmu_sc0002376.1_g000005.1 116 ELKHELKQGYKEKIVDIREEIL 137 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MRANGDFQVM DEKELDSFMT NYVLLLCSFK EQLQQHVRVH AMEAVMACWE LEQSLQSLTG 60 VSTAEGTGAT MSDDDEQFDS DINSYDASLD GHDTMGFGPL VPTESERSLM ERVRQELKHE 120 LKQGYKEKIV DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL 180 QLKQINNWFI NQRKRNWHSN LSTTSVLKSK RKSNAGDGNT QQFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-133	TALE family protein