PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002169.1_g000034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NF-YB | ||||||||
Protein Properties | Length: 154aa MW: 17564.6 Da PI: 5.3485 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 157.4 | 2.4e-49 | 6 | 101 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +eqdr+lPianv+rimk++lP++ak+sk+ak+ +qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++y+e+ + Rmu_sc0002169.1_g000034.1 6 EEQDRLLPIANVGRIMKQILPQRAKVSKEAKQRMQECATEFLSFVTGEASDKCHKENRKTVNGDDICWALSALGFDNYAEATTR 89 69********************************************************************************** PP NF-YB 86 ylkkyrelegek 97 yl+k+re+e+e+ Rmu_sc0002169.1_g000034.1 90 YLHKFREAERER 101 *********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 154 aa Download sequence |
MVDHEEEQDR LLPIANVGRI MKQILPQRAK VSKEAKQRMQ ECATEFLSFV TGEASDKCHK 60 ENRKTVNGDD ICWALSALGF DNYAEATTRY LHKFREAERE RLAANQSNVN INTSSSSPLE 120 IREEDQPIYL SGTQTPNLEF RILEKGDNSF AKQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09030.1 | 8e-57 | NF-YB family protein |