PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002141.1_g000016.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 177aa    MW: 20007.7 Da    PI: 10.2428
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002141.1_g000016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.31.9e-163190356
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+R +ek
  Rmu_sc0002141.1_g000016.1 31 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIKNKNVFYWFQNQRVREK 90
                               7*****************6579************************************99 PP
2Wus_type_Homeobox93.42e-303093365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+i++kNVfyWFQN++ Re+ k+
  Rmu_sc0002141.1_g000016.1 30 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIKNKNVFYWFQNQRVREKLKK 93
                               79****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MEPQNRHPTE NGGSNKAAES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIKNKNVFY WFQNQRVREK LKKKNLTSDV QVPKQRSGLV GGSIMEQRGE  120
DHQEIKTLPL FAMHGEDIFG NMKTTSGGGS GHGGGSYISL ELSLSCEGKA GKRFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-26WOX family protein