PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002141.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 246aa MW: 27004.8 Da PI: 4.4354 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 35.7 | 1.5e-11 | 50 | 107 | 6 | 57 |
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 t+t+ ql++L+el++ ++p+ e+++ + +l +++ ++V++WFq +a+e++ Rmu_sc0002141.1_g000004.1 50 TPTPAQLRILQELYYDraLKNPTPEQIQGICLHLkpygQIENKNVFFWFQSLKARERQ 107 79************96579*************************************96 PP | |||||||
2 | Wus_type_Homeobox | 78.6 | 8.5e-26 | 48 | 108 | 5 | 64 |
Wus_type_Homeobox 5 RWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 tPtp Q++iL+ely+ ++l++P+ e+iq i +L+ yG+ie+kNVf+WFQ kaRerqk Rmu_sc0002141.1_g000004.1 48 QGTPTPAQLRILQELYYdRALKNPTPEQIQGICLHLKPYGQIENKNVFFWFQSLKARERQK 108 569************9879*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence |
MEPRTLQLME LQTQQQMELQ AQQQVEDGGN NQAAGSSANT PIRPTNNQGT PTPAQLRILQ 60 ELYYDRALKN PTPEQIQGIC LHLKPYGQIE NKNVFFWFQS LKARERQKLK EIRNVRVGGS 120 LDLKFGSTSS TDGVRSIDLN FGSTDSTGDD GSIDLTLGSC VDYGVDPYSS SPFNANTNTT 180 YFCTTGGQSF MEQRGGDHQE VETLPLFPVH GEDVLGNPKI TSEEGSAFGY YFGGSDGYNI 240 VSPVSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-20 | WOX family protein |