PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002131.1_g000031.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | C2H2 | ||||||||
Protein Properties | Length: 137aa MW: 14996.7 Da PI: 4.3407 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 24.1 | 9.2e-08 | 46 | 67 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg sF+ +++Lk+H+++H Rmu_sc0002131.1_g000031.1 46 TCEECGASFKKPEYLKQHMQSH 67 6*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MNTIHYMEAN TTGATDKLNE VDIESGEDEM EMAKASEEVV VQNSNTCEEC GASFKKPEYL 60 KQHMQSHSLE VGDIEGDAPS AKRLRMSSSD ALQDMISGEE LSFIWKYDAD PAAKATAATV 120 LGIQVGCGFR SNIPCRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 2e-09 | C2H2 family protein |