PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002119.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 315aa    MW: 35835.4 Da    PI: 9.0957
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002119.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.29.6e-2127357127
                        NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127
                                ew+fF++++ ky++++r+nr+tk+  Wk tgk++ ++++ +++++g k+tL+fy+grapk++kt+Wv+he  
  Rmu_sc0002119.1_g000019.1   2 EWFFFTRKAYKYNKSSRSNRSTKKIHWKITGKERGIKAQrSKAVIGKKRTLTFYQGRAPKSKKTSWVIHEHY 73 
                                8************************************98566679*************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEWFFFTRKA YKYNKSSRSN RSTKKIHWKI TGKERGIKAQ RSKAVIGKKR TLTFYQGRAP  60
KSKKTSWVIH EHYLPGDGVA SYPKQAQGDF VICLLKIRSD RKDSPVSNEG EAKSTSVSEM  120
NQEGNEKLLF HQPQPLDDCC SSALQSPVSQ ELEAVLQTNV TNDDCNELQS PFGDSDSYLL  180
DGNEVSTCDE DETMYNVFPQ VGCAWCGHID SDLSFLDRER GQARCRSRAR LASGAIRRLY  240
CSGDRSGGCE IRLHDRGVAG EGRVLFRIWY LMLFRFWGGL RWDEALRRRM AAARMGVWNR  300
APEGWAWAPF ASYAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.11e-16NAC family protein