PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0002083.1_g000041.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 205aa MW: 23043.5 Da PI: 4.5601 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47 | 4.4e-15 | 14 | 74 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 R+t+t++ql++L+el++ ++p+ e+++e+ +l ++ +++V++WFqN +a e++ Rmu_sc0002083.1_g000041.1 14 YRWTPTPDQLRILQELYYDkvLKNPTPEQIQEICLHLqqygQIGDKNVFFWFQNLKACERQ 74 6****************96679*********************************998885 PP | |||||||
2 | Wus_type_Homeobox | 92.3 | 4.5e-30 | 13 | 75 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + RWtPtp+Q++iL+ely+ + l++P+ e+iq+i +L++yG+i+dkNVf+WFQN ka erqk Rmu_sc0002083.1_g000041.1 13 NYRWTPTPDQLRILQELYYdKVLKNPTPEQIQEICLHLQQYGQIGDKNVFFWFQNLKACERQK 75 68***************987899***************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MEPRTLQLME PTNYRWTPTP DQLRILQELY YDKVLKNPTP EQIQEICLHL QQYGQIGDKN 60 VFFWFQNLKA CERQKLREFR NVRVGGSLDL NFGSTSSTDN GRSIDLNFGS TGSTSTDRSI 120 DLNFGSRVGY GVDGSIMEQR GEYHQEIETL PLFPMHGEDI FGNMKTTSEG GRGYGWYSGG 180 WDDNNGGSCI SLELSLNSSG GADMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-22 | WOX family protein |