PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001875.1_g000015.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 499aa MW: 55866 Da PI: 6.7025

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001875.1_g000015.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.4	5.6e-32	230	283	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Rmu_sc0001875.1_g000015.1 230 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 283 9****************************************************7 PP
2	Myb_DNA-binding	48	2.9e-15	231	282	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Rmu_sc0001875.1_g000015.1 231 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 282 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MELFPAQPDL SLQISPPNTK PTSSGSWRRS AEEEEAAEVD LGFWKRALDS RNSSISSDTF 60 SDLSLSNPTR LSHDQYSNTN RINHFHHQNH FGLQNGHNGN TNGLLFHAFQ QNQFLNPQHQ 120 LHHHQRVFDQ QHQQEQQGGY LGPELGFLRP IRGIPVYQNP PPSNPHLHHH HPPPNLFPFS 180 AQNIKPNLNL DATATSLSSS NSTLSSPSSN PFLRSRFLSR FPAKRSMRAP RMRWTTTLHA 240 RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKA AATSGQSELY 300 ENASSGDTTE DIMFDNINQN PTRSSEQGRP NHAQDKEYYG GLWSNSSREA WLHGNKPKDD 360 SAGNMPSLLD DEKDMMDPKD LRSNFERISD NVDALACKAA GHLVQQYELS PVSFECDCLG 420 AVNAISSSCE NTSILGRIYD DISSCLETLP GSSFSYICRD ANMVAHKLAK FALVSDFNLY 480 WSGFVPMEIS GFLATLCTQ

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MELFPAQPDL SLQISPPNTK PTSSGSWRRS AEEEEAAEVD LGFWKRALDS RNSSISSDTF  60
SDLSLSNPTR LSHDQYSNTN RINHFHHQNH FGLQNGHNGN TNGLLFHAFQ QNQFLNPQHQ  120
LHHHQRVFDQ QHQQEQQGGY LGPELGFLRP IRGIPVYQNP PPSNPHLHHH HPPPNLFPFS  180
AQNIKPNLNL DATATSLSSS NSTLSSPSSN PFLRSRFLSR FPAKRSMRAP RMRWTTTLHA  240
RFVHAVELLG GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTDKA AATSGQSELY  300
ENASSGDTTE DIMFDNINQN PTRSSEQGRP NHAQDKEYYG GLWSNSSREA WLHGNKPKDD  360
SAGNMPSLLD DEKDMMDPKD LRSNFERISD NVDALACKAA GHLVQQYELS PVSFECDCLG  420
AVNAISSSCE NTSILGRIYD DISSCLETLP GSSFSYICRD ANMVAHKLAK FALVSDFNLY  480
WSGFVPMEIS GFLATLCTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-62	G2-like family protein