PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001852.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 332aa MW: 34273.1 Da PI: 9.5123

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001852.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.6	2.8e-38	25	85	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprC+stntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s Rmu_sc0001852.1_g000001.1 25 EQEHLPCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 85 57889****************************************************9876 PP
2	zf-Dof	39.5	1.1e-12	152	178	36	62
zf-Dof 36 CrryWtkGGalrnvPvGggrrknkkss 62 rryWt+GG+lr++PvGgg+rkn k+s Rmu_sc0001852.1_g000001.1 152 PRRYWTHGGTLRDIPVGGGSRKNAKRS 178 59*********************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MPSDSGDPNN RRPTKAQSLG APPPEQEHLP CPRCESTNTK FCYYNNYNFS QPRHFCKSCR 60 RYWTHGGTLR DIPVGGGSRK NAKRSRTSST GSMVSSASDH ALPATPVFVP VSAGQGGADA 120 VGLGRPEQPE THHYKLLQQH SNVLIGGSHH SPRRYWTHGG TLRDIPVGGG SRKNAKRSRT 180 SSTGSMVSSA SDHALPATPV FVPVSAGQGG AGGGAGQFGG CGVKGNVSNG GSFTSLLNTQ 240 PGFLALGGFG LGLATGFEEM GFGFGRAMWP FPGVGSDGGA GIGANGVSHG MMNTWQFENG 300 ETGGLVNVGL GGGGEFCSWP ELAISTPGNG LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	1e-39	Dof family protein