PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001787.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HSF

Protein Properties

Length: 532aa MW: 58533.7 Da PI: 8.9178

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001787.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	40.5	7.4e-13	472	521	2	51
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HH CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfa 51 F +k++++++d++l+ +isw ++g+sfvv+d+ efa+ vL + Fkhsn++ Rmu_sc0001787.1_g000003.1 472 FQSKTFDLVDDPSLDLIISWGSTGRSFVVWDPVEFARLVLRRNFKHSNLQ 521 889********************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MACIKHTVRP PKVLATASSP APPLATRPSR RSNRLHRSLD SGPPTSSEHP QALPDSPSQS 60 PAQAPSSPSG SEHSSAATSL SYSAASEPAP TSPSPALTSP HRSPSPPLPA LPSKRPRSSG 120 CSAPSSSRSI NPRKTRKDSL FVTHTQRVDY EKYTCLRPVV YEKRFHVDEL GSLFAETVRI 180 FRWRSVLDVL PTPNLTVVRE FYACCSPNMP AQVDLLNAAT LIGCNVDIRG VSIPFTPTTI 240 RETLGLLAPV SEMSKIDKEL VALSIDTVVA ALYEDRPDAT PVELSAGDLS EFCRLLGHLV 300 RTLLYPSTQS SKITLEEARL IYVLNSKGPY LPLEYYMYTT IRKAAVEGRR HKKAALVFPS 360 LITAVCQAKG VVFEDSDEMA PHLKVFSRSS LLHSSSQSKT KGISVDITSL SRPSLNISRF 420 FVSFGIPIQK AEKKPYFDLG LVWDCCAVRR STSELDMRGN TSELAETPVT PFQSKTFDLV 480 DDPSLDLIIS WGSTGRSFVV WDPVEFARLV LRRNFKHSNL QKEEEEKLNE QS

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MACIKHTVRP PKVLATASSP APPLATRPSR RSNRLHRSLD SGPPTSSEHP QALPDSPSQS  60
PAQAPSSPSG SEHSSAATSL SYSAASEPAP TSPSPALTSP HRSPSPPLPA LPSKRPRSSG  120
CSAPSSSRSI NPRKTRKDSL FVTHTQRVDY EKYTCLRPVV YEKRFHVDEL GSLFAETVRI  180
FRWRSVLDVL PTPNLTVVRE FYACCSPNMP AQVDLLNAAT LIGCNVDIRG VSIPFTPTTI  240
RETLGLLAPV SEMSKIDKEL VALSIDTVVA ALYEDRPDAT PVELSAGDLS EFCRLLGHLV  300
RTLLYPSTQS SKITLEEARL IYVLNSKGPY LPLEYYMYTT IRKAAVEGRR HKKAALVFPS  360
LITAVCQAKG VVFEDSDEMA PHLKVFSRSS LLHSSSQSKT KGISVDITSL SRPSLNISRF  420
FVSFGIPIQK AEKKPYFDLG LVWDCCAVRR STSELDMRGN TSELAETPVT PFQSKTFDLV  480
DDPSLDLIIS WGSTGRSFVV WDPVEFARLV LRRNFKHSNL QKEEEEKLNE QS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	4e-20	HSF family protein