PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001684.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 823aa MW: 93204.9 Da PI: 10.062

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001684.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.9	9.9e-33	564	618	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LH+rFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl Rmu_sc0001684.1_g000008.1 564 KPRLRWTPDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 618 79****************************************************8 PP
2	Myb_DNA-binding	66.5	4.9e-21	566	617	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ Rmu_sc0001684.1_g000008.1 566 RLRWTPDLHDRFVDAVTKLGGPdkaTPKSVLRLMGlKGLTLYHLKSHLQKYR 617 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
LVALKAALDG SRAIRGACSG MCQSWRSKLE GFGGMWGADS IVGGGFARFE LEAGKRRHAE 60 LATSSGEFVQ RAVISLRFWS DLDCGLTAGS NDERYCVDWW WWFCEMVARR CVSSGCRGKA 120 RKRWVGEIEE GCCREGESKG SRMLRRFDKV KPSTTPLIVR SLDLENDPLR PKDDDEDVLE 180 AKVPYLSIIG ALLYLAQCTR PDISFVVNLL ARHRSVPIRR HWTGDICLFY PYRKMMNSDP 240 SHTRNVANTG LHPLSPSQNN IGVLEGFVVT GYLSDPHKGK KFPLRAHQAR LGQGPHPSPR 300 RHVVSTIRSS FTRPAQPSLC HPDPNLRTPH TAINKVVQSW SAQPPLRDDA QKSDARAIQY 360 TLSTNNHLRS SLEQYTSRTH SAAPKTSARL EASPDCRAPP DEHEFSLEKT SLRDRTIFVT 420 DKMPGGPHTP PPRAVRIFLQ SRRMRWWRNV SPPAHVYALK AEMTPPHFSI TIIITTVLSP 480 PPPRRPRRDQ KRKKKENLSN IPRWLSSHVL LRLSLQIRRR PFLSNFQISA TWEFGMEMNY 540 NYGGGGQEIS CPYENGVMMT RDPKPRLRWT PDLHDRFVDA VTKLGGPDKA TPKSVLRLMG 600 LKGLTLYHLK SHLQKYRLGQ QSRKQNSAEQ GRENNGDSFV HFSNHHSTGS TTKSSRGNAE 660 QGTIPLSEDL KCQIEVQNRF QEQLEVQKKL QMRIEAQGKY LQTILEKAQK GLSIDMKGPI 720 TAEATRAQLT DFNLALSNFM ENMSEEERRV NIIEMNEAYK KSNGSTFQIY EEGNIGGENK 780 DSKLKVERGS IHFDLNTKGS YDYVGTNGTE FEPRCFRLQD SSL

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

LVALKAALDG SRAIRGACSG MCQSWRSKLE GFGGMWGADS IVGGGFARFE LEAGKRRHAE  60
LATSSGEFVQ RAVISLRFWS DLDCGLTAGS NDERYCVDWW WWFCEMVARR CVSSGCRGKA  120
RKRWVGEIEE GCCREGESKG SRMLRRFDKV KPSTTPLIVR SLDLENDPLR PKDDDEDVLE  180
AKVPYLSIIG ALLYLAQCTR PDISFVVNLL ARHRSVPIRR HWTGDICLFY PYRKMMNSDP  240
SHTRNVANTG LHPLSPSQNN IGVLEGFVVT GYLSDPHKGK KFPLRAHQAR LGQGPHPSPR  300
RHVVSTIRSS FTRPAQPSLC HPDPNLRTPH TAINKVVQSW SAQPPLRDDA QKSDARAIQY  360
TLSTNNHLRS SLEQYTSRTH SAAPKTSARL EASPDCRAPP DEHEFSLEKT SLRDRTIFVT  420
DKMPGGPHTP PPRAVRIFLQ SRRMRWWRNV SPPAHVYALK AEMTPPHFSI TIIITTVLSP  480
PPPRRPRRDQ KRKKKENLSN IPRWLSSHVL LRLSLQIRRR PFLSNFQISA TWEFGMEMNY  540
NYGGGGQEIS CPYENGVMMT RDPKPRLRWT PDLHDRFVDA VTKLGGPDKA TPKSVLRLMG  600
LKGLTLYHLK SHLQKYRLGQ QSRKQNSAEQ GRENNGDSFV HFSNHHSTGS TTKSSRGNAE  660
QGTIPLSEDL KCQIEVQNRF QEQLEVQKKL QMRIEAQGKY LQTILEKAQK GLSIDMKGPI  720
TAEATRAQLT DFNLALSNFM ENMSEEERRV NIIEMNEAYK KSNGSTFQIY EEGNIGGENK  780
DSKLKVERGS IHFDLNTKGS YDYVGTNGTE FEPRCFRLQD SSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	487	493	RRDQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	1e-81	G2-like family protein