PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001634.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 278aa MW: 32105.3 Da PI: 8.2055

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001634.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.5	1.3e-24	30	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn Y ++vGFs+r+++++k++++ + ++r fvCskeg + +k++ + ++++ra+trt+C+ak+ +k++k +g+++v ++e+ Rmu_sc0001634.1_g000004.1 30 EFYNMYERRVGFSIRRHTHYKNQHSSKLISRIFVCSKEGLCTIDKRD-HLTKNPRAKTRTSCDAKMIIKLDKsSGRYKVVQFEE 112 6****************************************9999.99*****************99******* PP FAR1 84 eHnHela 90 H+H+l+ Rmu_sc0001634.1_g000004.1 113 THSHDLV 119 **996 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MEAMDRDDST SPDYKPRNGM EFDSKELAYE FYNMYERRVG FSIRRHTHYK NQHSSKLISR 60 IFVCSKEGLC TIDKRDHLTK NPRAKTRTSC DAKMIIKLDK SSGRYKVVQF EETHSHDLVI 120 QECAHMLPSQ QNVTSSQGAE MELVQDSGIP LKLSFEFMGR EVGGRKALGF TKQDQKNYLQ 180 SKRQKKLAYG EAGCLLKYFQ NQALENPSFF YAVKLDSDEQ ITNIFWADAR MILDYGLFGD 240 VVSFDTTYRT NEVNRLFGVF VGFNHHRETV IFGGSNDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-57	FAR1 family protein