PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001522.1_g000029.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 116aa MW: 13059.5 Da PI: 8.2865 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 75.3 | 1.8e-23 | 57 | 106 | 1 | 50 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50 a+g+kd+h k++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++W Rmu_sc0001522.1_g000029.1 57 ATGRKDSHNKVCTTKGPRDRSIRLVADTAIQFYDMQDRLGYDQPSKVVDW 106 589*********************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MVSSFPDLNH QDSNHLARPI PTAAASQSTF MHHRCFWTAS SSTASEIVEA QGHILRATGR 60 KDSHNKVCTT KGPRDRSIRL VADTAIQFYD MQDRLGYDQP SKVVDWPHRT ELNHSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 1e-30 | TCP family protein |