PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0001426.1_g000012.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 94aa MW: 10187.4 Da PI: 4.0338 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 31.4 | 6.2e-10 | 2 | 42 | 36 | 66 |
TCP 36 qdeLGfdkdsktieWLlqqakpaikeltgt..........s 66 qd LG+d++ k+++W +++ak+ai+el+ s Rmu_sc0001426.1_g000012.1 2 QDWLGYDRPCKAVDWVIKKAKAAIDELPPWnpnsisvqtiS 42 99**************************9955444443222 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 94 aa Download sequence |
MQDWLGYDRP CKAVDWVIKK AKAAIDELPP WNPNSISVQT ISSPPEWSGG AGESEQLEFS 60 AGKDGVEAEV VNLWLPTIAS DQSLASGQSC LLDR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G53230.1 | 3e-12 | TCP family protein |