PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001424.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 243aa MW: 27035.1 Da PI: 8.4592 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 32.1 | 1.9e-10 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+ +t++ +++ +elF++ + + e+++++ +l +++ ++V++WF N+Ra+ekk Rmu_sc0001424.1_g000004.1 30 RTRWIPTTDHIRIRKELFYNkgVKSTTIEQIQRICLQLkwygKIEFKNVYFWFVNQRAREKK 91 89*****************77799*************************************8 PP | |||||||
2 | Wus_type_Homeobox | 71.3 | 1.6e-23 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +rtRW Pt++ i+i +el++ +G+++ + e+iqri +L+ yGkie kNV++WF N++aRe++k+ Rmu_sc0001424.1_g000004.1 29 SRTRWIPTTDHIRIRKELFYnKGVKSTTIEQIQRICLQLKWYGKIEFKNVYFWFVNQRAREKKKR 93 789**************98769****************************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MEPQNRHPTE DGGSNKAAGS SANMLRRESR TRWIPTTDHI RIRKELFYNK GVKSTTIEQI 60 QRICLQLKWY GKIEFKNVYF WFVNQRAREK KKRSTSDVHV PMQRSGLVGD DNVTNQYINF 120 ESSTPASASS AGVMITFNGQ IGNYGGYGSI NMENSARDCS ISAGGGTIST FFDMNVEQTF 180 MEQRGEDHQE IETLSLFPVH GEDIFGNMKT TSDGGGSHGG GSYISLELSL SCEGKAGKSF 240 RSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-24 | WOX family protein |