PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001366.1_g000022.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family Dof
Protein Properties Length: 314aa    MW: 34469.9 Da    PI: 7.2593
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001366.1_g000022.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.81.6e-4039100263
                     zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                                +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  Rmu_sc0001366.1_g000022.1  39 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 100
                                7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MDPSSGQQNQ DMQAHNSLDM LVSSKSQQQT DQRKPRPQPE QALKCPRCDS TNTKFCYYNN  60
YSLTQPRYFC KSCRRYWTKG GTLRNVPVGG GCRKNKRSSS KRSSQDPQQP LTPNSNPLLP  120
SLSYDSNDLS LAFARLQRSC GQLGYDDHLT MLGNPTTNSH SDILSNGSSA SASPGFLDAL  180
RTGFLETHNS NSFQNNLYYG FGSSGGNTMV GEAEMDNGVC GEMGLHPYEE LSNVATTTAV  240
TVTTMKQELS RDIETNNNRV LWGFPWQMNN GDHHNLNMGG GGGGGGAHHE YDNSGRESWN  300
GLANPSWHGL LPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-36Dof family protein