PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0001353.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 301aa    MW: 32744 Da    PI: 11.3788
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0001353.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP843.6e-2655181289
                        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceae 76 
                                + +kd hsk++T++g+Rd Rv l a++ ++f+ +qd+LG+d++sk+ +W +++ak+ai+el+           +  s+  + + 
  Rmu_sc0001353.1_g000029.1  55 TDRKDCHSKVYTAKGPRDHRVPLAAHTTIQFYYVQDRLGYDRPSKAFDWVIKKAKAAIDELPPWnpnsisvqtT--SS-PTVPI 135
                                679************************************************************97776765431..22.11222 PP

                        TCP  77 sssssasnsssg.................................k 89 
                                s  + ++n s +                                 +
  Rmu_sc0001353.1_g000029.1 136 SVAQDTQNASLHfsmvealsslfanrrgamvgssgvaelvnqnssN 181
                                2222222222224445556566666665666665555555443322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEYAGRKMGE THNNLHHRAM TSSSAASRLG LGIRTASSSI AIEIVEARDH ILRATDRKDC  60
HSKVYTAKGP RDHRVPLAAH TTIQFYYVQD RLGYDRPSKA FDWVIKKAKA AIDELPPWNP  120
NSISVQTTSS PTVPISVAQD TQNASLHFSM VEALSSLFAN RRGAMVGSSG VAELVNQNSS  180
NFLQSTRASK LQPNPPAPAL HRPTKSTDRP RPAPQTAFIS LQHRRSNSSP FQISTIPVPE  240
KTQLNLTSAQ QIRPSPGAPN LLAGASSVSR PQLPGRTPLL SSCSRARPPN LISSTQQPAR  300
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.23e-33TCP family protein