PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001298.1_g000050.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRF

Protein Properties

Length: 327aa MW: 37275 Da PI: 9.0144

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001298.1_g000050.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.6	2.8e-25	81	125	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ Rmu_sc0001298.1_g000050.1 81 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEA 125 79****************************************997 PP
2	QLQ	56	1.2e-19	16	46	2	32
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLl 32 +FTa+Q+q+L++Q+l++Ky+++++P+P +L+ Rmu_sc0001298.1_g000050.1 16 PFTATQWQELEHQALIFKYMVSGVPIPTDLV 46 9****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MMSGGNPSSA RNYRYPFTAT QWQELEHQAL IFKYMVSGVP IPTDLVYSFK RRLDSSISSR 60 LFPHHPFGWG CYDMGFGRKI DPEPGRCRRT DGKKWRCSKE AYPDSKYCER HMHRGRNRSR 120 KPVEASSSSS TTTPNNNNTI PTPPEYNPAS IHKNLSKTSP SMFSSSFTNE TPHTQHQSSS 180 LYPFLSRPQG SGTNPQLFLN SGSYVSEADH RDYRYLQGTK EGVDHELAFF PAESSANARS 240 LMSSYKGYSS QSQFQSLTDH YPQQQSQDEQ HCYVLGTDFK SSRPIKTENK EADQTQKSLH 300 HFFGDWPPKS TDTWLDLAPN SRLHNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-62	GRF family protein