PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001291.1_g000045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 168aa MW: 18810 Da PI: 8.6898 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.6 | 8.8e-18 | 30 | 90 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++t++q+++L+e++ + ++p+ e+ ++++ ++ +++ ++V++WFqN++ +e++ Rmu_sc0001291.1_g000045.1 30 STRWAPTTDQIRILKEFYDNgGKNPTPEQVQRITLQMkrygQVENKNVFYWFQNHKSRERQ 90 58*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 104.3 | 7.9e-34 | 29 | 92 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW+Pt++Qi+iL+e y++G ++P+ e++qrit ++++yG++e+kNVfyWFQN+k+Rerqk+ Rmu_sc0001291.1_g000045.1 29 SSTRWAPTTDQIRILKEFYDNGGKNPTPEQVQRITLQMKRYGQVENKNVFYWFQNHKSRERQKK 92 689***********************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEPQTQQPTE DGGSNKAVGS SANMHCRRSS TRWAPTTDQI RILKEFYDNG GKNPTPEQVQ 60 RITLQMKRYG QVENKNVFYW FQNHKSRERQ KKKLTSDVHV PIQRSGLVGG SINLNFGLTC 120 SAGVGGSIME QRGEDHQEIE TLPLFPMHGE DIFGNMKTTS EGGSGYGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-28 | WOX family protein |