PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001287.1_g000018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | CAMTA | ||||||||
Protein Properties | Length: 243aa MW: 27919.4 Da PI: 9.8189 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 143.7 | 5e-45 | 20 | 124 | 2 | 107 |
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 + k+rwl++ ei ++L+n+++ +e++++p+sgsl Ly+r ++r frkDGy wkk kdgk+v+E+he+LK +gve+l+cyY Rmu_sc0001287.1_g000018.1 20 SQAKHRWLRPAEIFEVLHNHSRLC-LSEPADKPSSGSLYLYDRNVLRSFRKDGYRWKKTKDGKAVKEAHERLKAKGVEALHCYY 102 4569******************66.6799******************************************************* PP CG-1 86 ahseenptfqrrcywlLeeele 107 ah+ en++fqrrcyw+++ + Rmu_sc0001287.1_g000018.1 103 AHGAENENFQRRCYWMIDDSAV 124 *****************99843 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MAARKRQRLD DQLELPQILS QAKHRWLRPA EIFEVLHNHS RLCLSEPADK PSSGSLYLYD 60 RNVLRSFRKD GYRWKKTKDG KAVKEAHERL KAKGVEALHC YYAHGAENEN FQRRCYWMID 120 DSAVFAILLH LLFFFLPPQS PSTSSSRPQR ANRVGPELAA GGESELDVEG VRWRGDHDER 180 ERVAGGGNVG DRRGGGDGLR GGEEPDLADL RIADEEAERK QREEAEKEKK RKQESKKKKK 240 KNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 2e-47 | CAMTA family protein |