PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0001083.1_g000011.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 634aa MW: 70466.7 Da PI: 6.9192

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0001083.1_g000011.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7e-09	385	422	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + Rmu_sc0001083.1_g000011.1 385 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 422 554459******************************88 PP
2	BELL	113.2	1.4e-36	247	317	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + elqk+k++Ll++leeV++rYk+y++q+++v+ssFe+vag g+a++Y +lA+ka+SrhFr+Lkd i+ qi Rmu_sc0001083.1_g000011.1 247 FVELQKRKTRLLQMLEEVERRYKHYCDQMKAVVSSFETVAGTGAATVYSKLASKAMSRHFRSLKDGIVAQI 317 679******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MARELCSEDH KSSSVGFCYS DVSSANPTIH HQNQFTNQIQ GFDQSNPAEI FNLTTGMEMI 60 GFSKGAFFSK HGGGGGGPSS SKGADHFYHP HQQEYNTTGM SEASSENQNL MESGGAWHQE 120 NSNNRFLVDD SSLRQTNHHQ DIGSINQSHM ILQDGYLGKS SGLGHQSLLH ENQAAASGLF 180 QLRNSKYLGP AQELLNEFCS LGTKQTDALG VSKHKSNKTK QWEDQDNNNG STSSSSKKQS 240 SLYSLEFVEL QKRKTRLLQM LEEVERRYKH YCDQMKAVVS SFETVAGTGA ATVYSKLASK 300 AMSRHFRSLK DGIVAQIQAT RKAMGEKDPV APGASRGETP RLRILDQTLR QQRAFQQMNM 360 MESHPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI LARQTGLSRS QVSNWFINAR 420 VRLWKPMVEE MYMEETKEHE NNNNMSSSDG VTTDHHGDPS TQMTRPEDQK PTQDQLQLVR 480 IDSECLSSII TNNPGEKSTG HDSRSGKSAL QMHPQHNFGR VTDAFGSSME LDFSTYNHHH 540 QSGGAVTYGN ENPNQSFNGG GHGVSLTLGL NQHGGTNGVS LAFSPSSQSS LFYPRDHIEE 600 CQPVQYSSLL DGEGQNNLPY RNLMGAQLLH DLAG

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MARELCSEDH KSSSVGFCYS DVSSANPTIH HQNQFTNQIQ GFDQSNPAEI FNLTTGMEMI  60
GFSKGAFFSK HGGGGGGPSS SKGADHFYHP HQQEYNTTGM SEASSENQNL MESGGAWHQE  120
NSNNRFLVDD SSLRQTNHHQ DIGSINQSHM ILQDGYLGKS SGLGHQSLLH ENQAAASGLF  180
QLRNSKYLGP AQELLNEFCS LGTKQTDALG VSKHKSNKTK QWEDQDNNNG STSSSSKKQS  240
SLYSLEFVEL QKRKTRLLQM LEEVERRYKH YCDQMKAVVS SFETVAGTGA ATVYSKLASK  300
AMSRHFRSLK DGIVAQIQAT RKAMGEKDPV APGASRGETP RLRILDQTLR QQRAFQQMNM  360
MESHPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI LARQTGLSRS QVSNWFINAR  420
VRLWKPMVEE MYMEETKEHE NNNNMSSSDG VTTDHHGDPS TQMTRPEDQK PTQDQLQLVR  480
IDSECLSSII TNNPGEKSTG HDSRSGKSAL QMHPQHNFGR VTDAFGSSME LDFSTYNHHH  540
QSGGAVTYGN ENPNQSFNGG GHGVSLTLGL NQHGGTNGVS LAFSPSSQSS LFYPRDHIEE  600
CQPVQYSSLL DGEGQNNLPY RNLMGAQLLH DLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-126	TALE family protein