PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0001010.1_g000092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 680aa MW: 74688.5 Da PI: 9.252 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.4 | 6.9e-08 | 582 | 631 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Rmu_sc0001010.1_g000092.1 582 RRPFSVAEVEALVQAVEKLGTGRWRDVKMRAFenaKHRTYVDLKDKWKTL 631 6789999*******************9766667**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 680 aa Download sequence |
MVLQKRLDYG FNGFQVPVTP RAPRSARRRS TISKRIEDSS MGAFDLLATV AGKLLLEGES 60 SPASSHTSTG KEKCSIINDS CPNGDKPLKV EPCDQGSCDR KFFVSDNISQ GHNQSCSSKE 120 SPVHQNESHS VMTTSNCSER FVSDMLVGGK CKNEIGSFTS KVQAGSSVYR ESGECKLDGE 180 AKVIVKDETN KRGEVLIGTG ADMCSLEDPM VWEGEPPALV SSDSSTKVPI CVDHIPQKPI 240 LASRDDVKIV SRDDDENSSG CTHPSTTTRY LRTAQRIGDR RIRKVLASRY WKAAPKMKDG 300 AHSNSYRDMR PIYHGRKNGY KRQRSQMNMP FKKRRLFDRS TVLKTNGGIS SESFFDSGEK 360 GITGNAPASC SKMQGANAIS SSVAGQHSVF QSRNSHVKLR IKSFRVPELF IEIPETATVG 420 SLKKTVMDAV TAVLGGGLCV GVLLQGKKLR DDTKTLQQTG ISQDDQLDSL GFTLEPNPPH 480 TPTPLCSGDS PRMLPCDVLQ PLTRYAPDPS SEASLEPHMA ALGSFIESDH DSAPSPTDTS 540 ADKSTTDSKA LVVVPEMSAE ALAVVPGNRK SKRFDIGQRR IRRPFSVAEV EALVQAVEKL 600 GTGRWRDVKM RAFENAKHRT YVDLKDKWKT LVHTARISPQ QRRGEPVPQE LLDRVLTAHA 660 YWSQQQAKQQ LKHPESCVLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-137 | MYB_related family protein |