PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000999.1_g000036.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 101aa MW: 11859.9 Da PI: 10.8835 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 26.5 | 1.7e-08 | 35 | 72 | 2 | 39 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 F k++++++d++l+ +isw ++ +sfvv+d+ efa+ Rmu_sc0000999.1_g000036.1 35 FCVKTFDLVDDPSLDLIISWGSTRRSFVVWDPVEFARL 72 999********************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MVRRARLNLS VLRVAIMWEC RSRFSVCKRL RCRRFCVKTF DLVDDPSLDL IISWGSTRRS 60 FVVWDPVEFA RLVSDRTRPE FHPEIRSGPA GPTLEEILPK I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 2e-15 | HSF family protein |