PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000988.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 466aa MW: 51073.4 Da PI: 7.215

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000988.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.4e-40	120	180	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s Rmu_sc0000988.1_g000022.1 120 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 180 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MLQETKDPAI KLFGMKIPLP AAGDYDDLGF TMPGKKRVDQ EHEEEEEEEK DSPSTKDTES 60 IEEQDDSPKT EDSTSMEMLP DCNVNPKTPS IDEESAKSKA PKEKEQNDAT NLQEKTLKKP 120 DKILPCPRCN SMDTKFCYYN NYNVNQPRHF CKACQRYWTA GGTMRNVPVG AGRRKNKNSA 180 SHYRQITISE ALQVAQMDAP NGAQHPGLKS NGRVLNFGVD ALVCDSMASV LHLADKKGLN 240 GTTRNGFHKS EELVFPAPCK GRENGDDCSI ASSVTASKPQ IQNANGFSAQ IPCLPGVPWP 300 YQWNSAVPPP AFGPPGMPIP VFPAAYWNCG VPFQVPVPWF SPQAASPNQK SPNSASSSPT 360 LGKHSREGEI LRPEVHLEKE EPSKKKNGFV LVPKTLRIDD PSEAAKSSIW TTLGIKNDCI 420 SSGNGLFKAF QSQSKGDQKK HVPETSPALL ANPAALSRSL NFHERT

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MLQETKDPAI KLFGMKIPLP AAGDYDDLGF TMPGKKRVDQ EHEEEEEEEK DSPSTKDTES  60
IEEQDDSPKT EDSTSMEMLP DCNVNPKTPS IDEESAKSKA PKEKEQNDAT NLQEKTLKKP  120
DKILPCPRCN SMDTKFCYYN NYNVNQPRHF CKACQRYWTA GGTMRNVPVG AGRRKNKNSA  180
SHYRQITISE ALQVAQMDAP NGAQHPGLKS NGRVLNFGVD ALVCDSMASV LHLADKKGLN  240
GTTRNGFHKS EELVFPAPCK GRENGDDCSI ASSVTASKPQ IQNANGFSAQ IPCLPGVPWP  300
YQWNSAVPPP AFGPPGMPIP VFPAAYWNCG VPFQVPVPWF SPQAASPNQK SPNSASSSPT  360
LGKHSREGEI LRPEVHLEKE EPSKKKNGFV LVPKTLRIDD PSEAAKSSIW TTLGIKNDCI  420
SSGNGLFKAF QSQSKGDQKK HVPETSPALL ANPAALSRSL NFHERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-105	Dof family protein