PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000982.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 193aa MW: 21576.3 Da PI: 9.9778 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.9 | 2e-14 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+ +t++q+++L+el+ + + p+ e+ ++++ +l +++ ++V++WF N+R +ekk Rmu_sc0000982.1_g000002.1 30 NTRWLPTTDQIRILKELYDNkgVKSPTIEQVQRITLQLkwygQIEFKNVYFWFVNQRVREKK 91 58*****************7779**************************************8 PP | |||||||
2 | Wus_type_Homeobox | 84.1 | 1.6e-27 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie kNV++WF N++ Re++k+ Rmu_sc0000982.1_g000002.1 29 SNTRWLPTTDQIRILKELYDnKGVKSPTIEQVQRITLQLKWYGQIEFKNVYFWFVNQRVREKKKK 93 789****************989****************************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKELYDNK GVKSPTIEQV 60 QRITLQLKWY GQIEFKNVYF WFVNQRVREK KKKRKLTSDV QVPKKRSGLV GGSINLNFGS 120 TSSADVGGSI MEQRGEDHQE VKTLPLFPMH GEDIFGNMKT TSDGGGGHGG GSYISLELSL 180 SCEGKAGKSF WSR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 96 | EKKKKRKL |
2 | 90 | 95 | KKKKRK |
3 | 91 | 96 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-26 | WOX family protein |